Reflect – Automated Annotation of Biochemical Terms in web pages

Reflect

:: DESCRIPTION

Reflect is a free service that tags gene, protein, and small molecule names in any web page within a few seconds. Clicking on a tagged term opens a small popup showing summary information, as shown below. Reflect can be installed as a plugin to Firefox or Internet Explorer, or can used by entering a URL in the field above.

::DEVELOPER

Schneider (Reinhard) Group

:: SCREENSHOTS

:: REQUIREMENTS

  • Firefox / Internet Explorer

:: DOWNLOAD

 Reflect

:: MORE INFORMATION

Citation

Nat Biotechnol. 2009 Jun;27(6):508-10.
Reflect: augmented browsing for the life scientist.
Pafilis E, O’Donoghue SI, Jensen LJ, Horn H, Kuhn M, Brown NP, Schneider R.

OnTheFly 2.0 Beta – Automated Annotation of Biochemical Terms in PDF, Text and Microsoft Office documents

OnTheFly 2.0 Beta

:: DESCRIPTION

OnTheFly is a web-based tool capable of annotating genes proteins and chemicals in commonly used document formats such as PDF, Microsoft Word and Excel, comma-separated values, and plain text files.

::DEVELOPER

Schneider (Reinhard) Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser
  • Java

:: DOWNLOAD

 No

:: MORE INFORMATION

Citation

Bioinformatics. 2009 Apr 1;25(7):977-8. Epub 2009 Feb 17.
OnTheFly: a tool for automated document-based text annotation, data linking and network generation.
Pavlopoulos GA, Pafilis E, Kuhn M, Hooper SD, Schneider R.