:: DESCRIPTION
Paratome is an automated tool for the identification of Antigen Binding Regions (ABRs).
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Nucleic Acids Res. 2012 Jul;40(Web Server issue):W521-4. doi: 10.1093/nar/gks480. Epub 2012 Jun 6.
Paratome: an online tool for systematic identification of antigen-binding regions in antibodies based on sequence or structure.
Kunik V1, Ashkenazi S, Ofran Y.
:: DESCRIPTION
DisoRDPbind predicts the RNA-, DNA-, and protein-binding residues located in the intrinsically disordered regions.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
High-throughput prediction of RNA, DNA and protein binding regions mediated by intrinsic disorder.
Peng Z, Kurgan L.
Nucleic Acids Res. 2015 Oct 15;43(18):e121. doi: 10.1093/nar/gkv585.
:: DESCRIPTION
The ProPred-I is an on-line service for identifying the MHC Class-I binding regions in antigens. It implements matrices for 47 MHC Class-I alleles, proteasomal and immunoproteasomal models. The main aim of this server is to help users in identifying the promiscuous regions.
The ProPred is an on-line service for identifying the MHC Class-II binding regions in antigens.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Singh, H. and Raghava, G. P. S. (2003)
ProPred1: Prediction of promiscuous MHC class-I binding sites
Bioinformatics. 2003 May 22;19(8):1009-14.
Singh,H. and Raghava,G.P.S.(2001)
ProPred: Prediction of HLA-DR binding sites.
Bioinformatics,17(12), 1236-37.
:: DESCRIPTION
ANCHOR aims to predict binding regions in proteins that are disordered in isolation but can undergo a disorder-to-order transition upon binding to a structured protein partner. The approach is based on the energy estimation method and it uses a single amino acid sequence as an input.
DEVELOPER
Institute of Enzymology,the Biological Research Center of the Hungarian Academy of Sciences.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Zsuzsanna Dosztányi, Bálint Mészáros and István Simon (2009)
ANCHOR: web server for predicting protein binding regions in disordered proteins
Bioinformatics 25(20): 2745-2746.