NetworkDiversity 1.0.0 – Calculation of beta diversity over Phylogenetic Networks

NetworkDiversity 1.0.0

:: DESCRIPTION

Network Diversity  is a software package for calculating beta diversity over split systems, a widely used class of implicit phylogenetic networks.

::DEVELOPER

Beiko lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows /MacOsX
  • C++ Compiler

:: DOWNLOAD

 Network Diversity

:: MORE INFORMATION

Citation

Mol Biol Evol. 2012 Dec;29(12):3947-58. doi: 10.1093/molbev/mss200.
Measuring community similarity with phylogenetic networks.
Parks DH, Beiko RG.

EBD 1.0.8 – Taxon- and Phylogenetic-based Beta Diversity Measures

EBD 1.0.8

:: DESCRIPTION

EBD (Express Beta Diversity) is a software package for calculating measures of taxon- or phylogenetic-based beta diversity.

::DEVELOPER

Beiko lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • C++ Compiler

:: DOWNLOAD

  EBD

:: MORE INFORMATION

Citation

Parks, D.H. and Beiko, R.G.
Measures of phylogenetic differentiation provide robust and complementary insights into microbial communities.
ISME J. 2013 Jan;7(1):173-83