BayClone / BayClone2 1.1

:: DESCRIPTION

BayClone2 as an extension of BayClone provides a Bayesian solution using next-generation sequencing (NGS) data for joint inference on both, structure and sequencing variants within a subclone.

::DEVELOPER

Yuan Ji Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / MacOsX / Windows
• R

:: DOWNLOAD

 BayClone / BayClone2 

:: MORE INFORMATION

Citation

Pac Symp Biocomput. 2015;20:467-78.
Bayclone: bayesian nonparametric inference of tumor subclones using ngs data.
Sengupta S1, Wang J, Lee J, Müller P, Gulukota K, Banerjee A, Ji Y.

Bayesian Inference for Tumor Subclones Accounting for Sequencing and Structural Variants
Juhee Lee, Peter Mueller, Subhajit Sengupta, Kamalakar Gulukota, Yuan Ji
arXiv:1409.7158 [stat.ME]