AutoRT v1.0 – Peptide Retention Time Prediction using Deep Learning

AutoRT v1.0

:: DESCRIPTION

AutoRT is a peptide sequence-based RT prediction tool developed using automated deep learning and transfer learning. It can provide high accurate RT prediction with models trained using a small number of peptides (~1000) with transfer learning.

::DEVELOPER

the Zhang Lab

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

AutoRT

:: MORE INFORMATION

Citation

Wen B, Li K, Zhang Y, Zhang B.
Cancer neoantigen prioritization through sensitive and reliable proteogenomics analysis.
Nat Commun. 2020 Apr 9;11(1):1759. doi: 10.1038/s41467-020-15456-w. PMID: 32273506; PMCID: PMC7145864.