capDSD – Confidence, Augmented Pathway Diffusion State Distance

capDSD

:: DESCRIPTION

capDSD is an extension of DSD  that takes in to account a measure of interaction confidence while also incorporating directed pathway data.

::DEVELOPER

Cowen Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Python

:: DOWNLOAD

 capDSD

:: MORE INFORMATION

Citation:

Bioinformatics. 2014 Jun 15;30(12):i219-i227. doi: 10.1093/bioinformatics/btu263.
New directions for diffusion-based network prediction of protein function: incorporating pathways with confidence.
Cao M, Pietras CM, Feng X, Doroschak KJ, Schaffner T, Park J, Zhang H, Cowen LJ, Hescott BJ.