Tag: ArrayMaker

ArrayMaker 1.1 – Genotyping-by-Sequencing from Aligned Whole Genomes

ArrayMaker 1.1

:: DESCRIPTION

ArrayMaker is a user-friendly tool which extracts accurate single nucleotide polymorphism genotypes at pre-defined loci from whole genome alignments and presents them in a standard genotyping format compatible with association analysis software and datasets genotyped on commercial array platforms.

::DEVELOPER

ArrayMaker team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / Mac OsX
  • Perl

:: DOWNLOAD

 ArrayMaker

:: MORE INFORMATION

Citation:

Simple, rapid and accurate genotyping-by-sequencing from aligned whole genomes with ArrayMaker.
Willet CE, Haase B, Charleston MA, Wade CM.
Bioinformatics. 2014 Oct 21. pii: btu691.

ArrayMaker 2.6 – Provides Robotic Control of Microarrayer Robots

ArrayMaker 2.6

:: DESCRIPTION

ArrayMaker provides high performance robotic control of microarrayer robots with an incredibly intuitive, easy to use interface. ArrayMaker is optimized for use with the new generation of ultra fast linear servo driven arrayers, yet it is backwards compatible with the original MGuide style of ball-screw driven arrayers.

Features highly flexible configuration options, orange packing, replicate spots, replicate arrays, multiple slide and plate orientations.

::DEVELOPER

Derisi Lab

:: SCREENSHOTS

:: REQUIREMENTS

Windows 98/2000/NT/XP, Galil DMC-1832 Series PCI Bus Controller Card

:: DOWNLOAD

ArrayMaker 2.6, File Size:2,494K

:: MORE INFORMATION

This version has a new parameter in the “motor.cfg” file for a separate acceleration value for the x-stage during test prints. This value should be entered on the 19th line of your “motor.cfg” file, inserted between the “HPrintZ” line and the “SpeedX” line.