AxPyMOL 2.5 – PowerPoint Plug-In for Embedding 3D Molecular Images & Animations

AxPyMOL 2.5

:: DESCRIPTION

AxPyMOL, a plugin for Windows PowerPoint that enables presentation of 3-D molecular data without having to “tab out” of PowerPoint slides.

AxPyMOL allows users to easily embed PyMOL shows saved from actual PyMOL sessions directly into PowerPoint slides. During presentation, the PyMOL shows can be manipulated within PowerPoint to display structures using multiple vantage points and rendering schemes set up in advance. Users can simply advance through the saved scenes of a PyMOL show without ever exiting PowerPoint.

::DEVELOPER

Schrödinger, LLC

:: SCREENSHOTS

:: REQUIREMENTS

Windows
Office

:: DOWNLOAD

AxPyMOL

:: MORE INFORMATION

NetworkPainter – Pathway Animation in Cytobank

NetworkPainter

:: DESCRIPTION

NetworkPainter is a web-based program for visually analyzing data stored in Cytobank. NetworkPainter enables researchers to draw signaling network diagrams and animate them with time-lapsed experimental data such as flow and mass cytometry. NetworkPainter can be used to analyze any data contained within Cytobank.

::DEVELOPER

NetworkPainter team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

NetworkPainter: dynamic intracellular pathway animation in Cytobank.
Karr JR, Guturu H, Chen EY, Blair SL, Irish JM, Kotecha N, Covert MW.
BMC Bioinformatics. 2015 May 25;16:172. doi: 10.1186/s12859-015-0602-4.

SketchBio 0.0.10 – 3D Interface for Molecular Modeling and Animation

SketchBio 0.0.10

:: DESCRIPTION

SketchBio is a tool that incorporates state-of-the-art bimanual interaction and drop shadowsto enable rapid construction of molecular structures and animations

::DEVELOPER

CISMM (Computer Integrated Systems for Microscopy and Manipulation)

:: SCREENSHOTS

:: REQUIREMENTS

Windows
UCSF Chimera
Blender

:: DOWNLOAD

SketchBio

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2014 Oct 30;15(1):334.
SketchBio: a scientist’s 3D interface for molecular modeling and animation.
Waldon SM, Thompson PM, Hahn PJ, Taylor RM 2nd.