CHIP2SPELL 1.0.2 – Generate Input files for Alohomora_m

CHIP2SPELL 1.0.2

:: DESCRIPTION

Chip2Spell aims to speed up the preparation of linkage data files passed on to the Alohomora software for data from the Affymetrix or Illumina assays. Chip2Spell gathers the information necessary to supplement the genotype data (such as the genetic map of the markers and the population-specific allele frequencies) from publicly available annoation files from Affymetrix and Illumina. The program formats the genotype data for input into the Alohomora program.

::DEVELOPER

Marie-Pierre Dubé’s Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  Windows / MacOsX
  • Perl
:: DOWNLOAD

 CHIP2SPELL

:: MORE INFORMATION

Alohomora 0.33 – Linkage Analysis tools and Affymetrix Mapping

Alohomora 0.33

:: DESCRIPTION

Alohomora was designed to facilitate genome-wide linkage studies performed with high-density single nucleotide polymorphism (SNP) marker panels such as the Affymetrix GeneChip(R) Human Mapping 10K Array

::DEVELOPER

The Gene Mapping Center (GMC)

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 Alohomora

:: MORE INFORMATION

Citation:

Ruschendorf F, Nurnberg P.
ALOHOMORA: a tool for linkage analysis using 10K SNP array data.
Bioinformatics. 2005 May 1; 21(9): 2123-5.