PCAmask 20131203 – Analysis of Speciffic Ancestry Components in Admixed Individuals

 PCAmask 20131203

:: DESCRIPTION

PCAmask is an implementation of an algorithm designed to perform PCA on a dataset with a large number of missing values, as is often the case when studying speciffc ancestry components in admixed individuals. The program has been tailored to handle haplotype data.

:: DEVELOPER

the Bustamante Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R package

:: DOWNLOAD

  PCAmask

:: MORE INFORMATION

Citation

Moreno-Estrada A, Gravel S, Zakharia F, McCauley JL, Byrnes JK, et al. (2013)
Reconstructing the Population Genetic History of the Caribbean.
PLoS Genet 9(11): e1003925. doi:10.1371/journal.pgen.1003925