SwDMR 1.0.7
:: DESCRIPTION
swDMR is a free software using a sliding-window approach to identify differentially methylated regions (DMR) from whole-genome bisulfite sequencing. It is suitable for single base resolution methylation dataset through methylC-seq, BS-seq or RRBS technology.
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::DEVELOPER
Xianfeng Li (xfliwz@gmail.com), Institute of Genomic Medicine, Wenzhou Medical College, , China
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / MacOsX / Linux
- R package
- Perl
- BEDTools
:: DOWNLOAD
:: MORE INFORMATION
Citation
swDMR: A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing.
Wang Z, Li X, Jiang Y, Shao Q, Liu Q, Chen B, Huang D.
PLoS One. 2015 Jul 15;10(7):e0132866. doi: 10.1371/journal.pone.0132866.