SuGeT
:: DESCRIPTION
Given a set of gene trees and a species tree, SuGeT finds a supergenetree of the input trees that minimizes the reconciliation cost with the species tree. A supergenetree is a tree that “contains” all the input gene trees. The user can also specify to preserve the orthology/paralogy relations from the input trees.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
Lafond M, Chauve C, El-Mabrouk N, Ouangraoua A.
Gene Tree Construction and Correction Using SuperTree and Reconciliation.
IEEE/ACM Trans Comput Biol Bioinform. 2018 Sep-Oct;15(5):1560-1570. doi: 10.1109/TCBB.2017.2720581. Epub 2017 Jun 27. PMID: 28678712.