SSW – SIMD Smith-Waterman C/C++ Library for Use in Genomic Applications

SSW

:: DESCRIPTION

SSW (Striped-Smith-Waterman-Library) is a fast implementation of the Smith-Waterman algorithm whose API that can be flexibly used by programs written in C, C++ and other languages.

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::DEVELOPER

The MarthLab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C/C++ Compiler

:: DOWNLOAD

 SSW

:: MORE INFORMATION

Citation

SSW Library: An SIMD Smith-Waterman C/C++ Library for Use in Genomic Applications
Mengyao Zhao, Wan-Ping Lee, Erik Garrison, Gabor T. Marth
PLoS One. 2013 Dec 4;8(12):e82138. doi: 10.1371/journal.pone.0082138.