SSC (Stochastic Simulation Compiler) is a tool for creating exact stochastic simulations of biochemical reaction networks. The models are written in a succinct, intuitive format, where reactions are specified with patterns. Patterns mention only the part of the compound relevant to a given reaction, and correspond to an intuitive view of biochemical reactions. This enables complex biochemical signaling networks to be specified without the knowledge of any formal programming languages.
- Linux / Mac OS X
- GNU C Compiler
:: MORE INFORMATION
Lis, Mieszko et al. “Efficient stochastic simulation of reaction–diffusion processes via direct compilation.” Bioinformatics 25.17 (2009): 2289 -2291.