SSAKE 4.0 – Assembling Millions of short DNA Sequences

SSAKE 4.0

:: DESCRIPTION

SSAKE is a genomics application for assembling millions of very short DNA sequences.SSAKE is designed to help leverage the information from short sequence reads by stringently assembling them into contiguous sequences that can be used to characterize novel sequencing targets.

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::DEVELOPER

Canada’s Michael Smith Genome Sciences Centre

: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Perl

:: DOWNLOAD

 SSAKE

:: MORE INFORMATION

Citation

René L Warren, Granger G Sutton, Steven JM Jones, Robert A Holt. 2007
Assembling millions of short DNA sequences using SSAKE.
bioinformatics. 23:500-501.

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