SpliceMachine – Splice Site Prediction Tool

SpliceMachine

:: DESCRIPTION

SpliceMachine is a splice site prediction tool that

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  • shows state-of-the-art prediction performance on Arabidopsis thaliana and human sequences,
  • performs a computationally fast annotation and
  • can be trained by the user on its own data.

:: DEVELOPER

Bioinformatics & Systems Biology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 SpliceMachine

:: MORE INFORMATION

Citation:

Degroeve, S., Saeys, Y., De Baets, B., Rouzé, P., Van de Peer, Y. (2005)
Predicting splice sites from high-dimensional local context representations.
Bioinformatics 21, 1332-8.

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