SOESA 0.21b – Structure Optimization and Evaluation using Separations of Atoms

SOESA 0.21b

:: DESCRIPTION

Soesa is a program for use in evaluating and refining atomic models of protein structures. The program calculates an estimated prior probability of the interatomic distances in the structure by reference to an interatomic distance probability density function (PDF) database compiled from known structures. It also calculates derivatives with respect to atomic position vectors for use in molecular dynamics simulations and structure refinement.

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::DEVELOPER

Michael Wall

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 SOESA

:: MORE INFORMATION

Citation

Michael E. Wall, Shankar Subramaniam, and George N. Phillips, Jr.
Protein structure determination using a database of interatomic distance probabilities. 1999.
Protein Science 12:2720-27.