SKESA 2.4.0

:: DESCRIPTION

SKESA is a de-novo sequence read assembler for microbial genomes. It uses conservative heuristics and is designed to create breaks at repeat regions in the genome.

::DEVELOPER

NCBI – National Center for Biotechnology Information

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

SKESA

:: MORE INFORMATION

Citation

Souvorov A, Agarwala R.
SAUTE: sequence assembly using target enrichment.
BMC Bioinformatics. 2021 Jul 21;22(1):375. doi: 10.1186/s12859-021-04174-9. PMID: 34289805; PMCID: PMC8293564.

Souvorov A, Agarwala R, Lipman DJ.
SKESA: strategic k-mer extension for scrupulous assemblies.
Genome Biol. 2018 Oct 4;19(1):153. doi: 10.1186/s13059-018-1540-z. PMID: 30286803; PMCID: PMC6172800.