Sickle 1.33 – Windowed Adaptive Trimming for Fastq files using Quality

Sickle 1.33

:: DESCRIPTION

Sickle is a windowed adaptive trimming tool for FASTQ files using quality. Sickle is a tool that uses sliding windows along with quality and length thresholds to determine when quality is sufficiently low to trim the 3′-end of reads and also determines when the quality is sufficiently high enough to trim the 5′-end of reads. It will also discard reads based upon the length threshold.

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::DEVELOPER

UC Davis Bioinformatics Core

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • zlib

:: DOWNLOAD

 Sickle

:: MORE INFORMATION

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