SHRiMP 2.2.3

:: DESCRIPTION

SHRiMP (SHort Read Mapping Package) is a software package for aligning genomic reads against a target genome. It was primarily developed with the multitudinous short reads of next generation sequencing machines in mind, as well as Applied Biosystem’s colourspace genomic representation.

::DEVELOPER

 the Computational Biology Lab at the University of Toronto’sDepartment of Computer Science

:: SCREENSHOTS

Command

:: REQUIREMENTS

• Linux  / MacOsX

:: DOWNLOAD

 SHRiMP

:: MORE INFORMATION

Citation:

Matei David1, Misko Dzamba, Dan Lister, Lucian Ilie and Michael Brudno
SHRiMP2: Sensitive yet Practical Short Read Mapping
Bioinformatics (2011) 27 (7): 1011-1012.