SeqRate 1.0

:: DESCRIPTION

SeqRate is a software to predict both protein folding kinetic type (two-state versus multi-state) and real-value folding rate using sequence length, amino acid composition, contact order, contact number, and secondary structure information predicted from only protein sequence with support vector machines.

::DEVELOPER

Dr. Jianlin Cheng’s Bioinformatics and Systems Biology Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• PSPRO

:: DOWNLOAD

 SeqRate

:: MORE INFORMATION

Citation

Guanning Lin, Zheng Wang, Dong Xu, and Jianlin Cheng.
SeqRate: Sequence-Based Prediction of Protein Folding Rates Using Contacts, Secondary Structure and Support Vector Machines.
BMC Bioinformatics. 11(S3):S1, 2010.