ScalaBLAST 2.4.53 – Multiprocessor Implementation of the NCBI BLAST library

ScalaBLAST 2.4.53

:: DESCRIPTION

ScalaBLAST is a high-performance multiprocessor implementation of the NCBI BLAST library. ScalaBLAST supports all 5 primary program types (blastn, blastp, tblastn, tblastx, and blastx) and several output formats (pairwise, tabular, or XML).

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:: DEVELOPER

Computational Biology & Bioinformatics ,Pacific Northwest National Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • gcc
  • MPI

:: DOWNLOAD

 ScalaBLAST

:: MORE INFORMATION

Citation

Oehmen, C.S. and J. Nieplocha. 2006.
“ScalaBLAST: A scalable implementation of BLAST for high-performance data-intensive bioinformatics analysis“,
IEEE Transactions on Parallel and Distributed Systems, 17(8): 740-749.

Bioinformatics. 2013 Mar 15;29(6):797-8. doi: 10.1093/bioinformatics/btt013. Epub 2013 Jan 29.
ScalaBLAST 2.0: rapid and robust BLAST calculations on multiprocessor systems.
Oehmen CS, Baxter DJ.