SALSA v2.3 – Scaffold long read Assemblies with Hi-C data

SALSA v2.3

:: DESCRIPTION

SALSA is a tool to scaffold long read assemblies with Hi-C.

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::DEVELOPER

MarBL (Maryland Bioinformatics Labs)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

SALSA

:: MORE INFORMATION

Citation

Ghurye J, Pop M, Koren S, Bickhart D, Chin CS.
Scaffolding of long read assemblies using long range contact information.
BMC Genomics. 2017 Jul 12;18(1):527. doi: 10.1186/s12864-017-3879-z. PMID: 28701198; PMCID: PMC5508778.

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