RNApasta 1.6
:: DESCRIPTION
RNApasta is a utility for collecting statistics from aligned and structurally annotated RNA sequences.RNApasta is a java utility intended to work with RNA structural alignments, including the motifs of stem-loops and pseudoknots. RNApasta can perform a variety of statistical analyses, and has editing capabilities intended to be useful with alignments that contain variable data such as the presence or absence of stem-loops or pseudoknots across sequences. RNApasta can read Rfam-stockholm formatted files or pasta formatted files.
::DEVELOPER
The RNA-Informatics Research Lab
:: SCREENSHOTS
:: REQUIREMENTS
- Windows / MacOsX / Linux
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation
Malmberg, R., Shaw, T., and Cai, L. (2010)
RNApasta: a tool for analysis of RNA structural alignments,
Int J Bioinform Res Appl. 2010;6(6):571-83.