rMATS 4.1.1
:: DESCRIPTION
rMATS is a computational tool to detect differential alternative splicing events from RNA-Seq data.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/MacOsX
- Python
- Bowtie
:: DOWNLOAD
:: MORE INFORMATION
Citation
Shen S., Park JW., Lu ZX., Lin L., Henry MD., Wu YN., Zhou Q., Xing Y.
rMATS: Robust and Flexible Detection of Differential Alternative Splicing from Replicate RNA-Seq Data.
PNAS, 111(51):E5593-601. doi: 10.1073/pnas.1419161111
Shen S., Park JW., Huang J., Dittmar KA., Lu ZX., Zhou Q., Carstens RP., Xing Y.
MATS: A Bayesian Framework for Flexible Detection of Differential Alternative Splicing from RNA-Seq Data.
Nucleic Acids Research, 2012;40(8):e61 doi: 10.1093/nar/gkr1291