ReliefSeq – Ranking Features of Genetic Sequence data using Relief-F

ReliefSeq

:: DESCRIPTION

ReliefSeq is a feature (attribute) selection and ranking algorithm written in C++ designed to handle various types of genetic features including combinations of feature data types and endpoints (phenotypes/classes).

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::DEVELOPER

Insilico Research Group (McKinney Laboratory for Bioinformatics and In Silico Modeling)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 ReliefSeq

:: MORE INFORMATION

Citation

PLoS One. 2013 Dec 10;8(12):e81527. doi: 10.1371/journal.pone.0081527. eCollection 2013.
ReliefSeq: a gene-wise adaptive-K nearest-neighbor feature selection tool for finding gene-gene interactions and main effects in mRNA-Seq gene expression data.
McKinney BA, White BC, Grill DE, Li PW, Kennedy RB, Poland GA, Oberg AL.