RAVEN 2.5.1 – Reconstruction, Analysis, and Visualization of Metabolic Networks Toolbox

RAVEN 2.5.1

:: DESCRIPTION

The RAVEN Toolbox is a complete environment for reconstruction, analysis, simulation, and visualization of GEMs and runs within MATLAB.

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:: DEVELOPER

Systems & Synthetic Biology – SYSBIO, Chalmers University of Technology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows
  • Matlab
  • Excel

:: DOWNLOAD

 RAVEN

:: MORE INFORMATION

Citation

Wang H, Marcišauskas S, Sánchez BJ, Domenzain I, Hermansson D, Agren R, Nielsen J, Kerkhoven EJ.
RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor.
PLoS Comput Biol. 2018 Oct 18;14(10):e1006541. doi: 10.1371/journal.pcbi.1006541. PMID: 30335785; PMCID: PMC6207324.

PLoS Comput Biol. 2013;9(3):e1002980. doi: 10.1371/journal.pcbi.1002980. Epub 2013 Mar 21.
The RAVEN toolbox and its use for generating a genome-scale metabolic model for Penicillium chrysogenum.
Agren R1, Liu L, Shoaie S, Vongsangnak W, Nookaew I, Nielsen J.

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