RAVEN 2.5.1
:: DESCRIPTION
The RAVEN Toolbox is a complete environment for reconstruction, analysis, simulation, and visualization of GEMs and runs within MATLAB.
:: DEVELOPER
Systems & Synthetic Biology – SYSBIO, Chalmers University of Technology
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows
- Matlab
- Excel
:: DOWNLOAD
:: MORE INFORMATION
Citation
Wang H, Marcišauskas S, Sánchez BJ, Domenzain I, Hermansson D, Agren R, Nielsen J, Kerkhoven EJ.
RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor.
PLoS Comput Biol. 2018 Oct 18;14(10):e1006541. doi: 10.1371/journal.pcbi.1006541. PMID: 30335785; PMCID: PMC6207324.
PLoS Comput Biol. 2013;9(3):e1002980. doi: 10.1371/journal.pcbi.1002980. Epub 2013 Mar 21.
The RAVEN toolbox and its use for generating a genome-scale metabolic model for Penicillium chrysogenum.
Agren R1, Liu L, Shoaie S, Vongsangnak W, Nookaew I, Nielsen J.