QuASAR – Joint Genotyping & ASE Inference for RNA-seq data

QuASAR

:: DESCRIPTION

QuASAR (Quantitative allele specific analysis of reads) is an R package, that implements a statistical method for: i) genotyping from next-generation sequencing reads, and ii) conducting inference on allelic imbalance at heterozygous sites.

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::DEVELOPER

Roger Pique-Regi

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • R

:: DOWNLOAD

 QuASAR

:: MORE INFORMATION

Citation

QuASAR: Quantitative Allele Specific Analysis of Reads.
Harvey CT, Moyerbrailean GA, Davis GO, Wen X, Luca F, Pique-Regi R.
Bioinformatics. 2014 Dec 4. pii: btu802