PTM-Shepherd v1.1.1

:: DESCRIPTION

PTM-Shepherd automates characterization of PTM profiles detected in open searches based on attributes such as amino acid localization, fragmentation spectra similarity, retention time shifts, and relative modification rates.

::DEVELOPER

Proteomics & Integrative Bioinformatics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

PTM-Shepherd

:: MORE INFORMATION

Citation

Geiszler DJ, Kong AT, Avtonomov DM, Yu F, Leprevost FDV, Nesvizhskii AI.
PTM-Shepherd: Analysis and Summarization of Post-Translational and Chemical Modifications From Open Search Results.
Mol Cell Proteomics. 2020 Dec 11;20:100018. doi: 10.1074/mcp.TIR120.002216. Epub ahead of print. PMID: 33568339; PMCID: PMC7950090.