PredAlgo 1.0 – Protein Subcellular Localization Prediction in Green Algae

PredAlgo 1.0

:: DESCRIPTION

PredAlgo is a new sequence analysis tool, dedicated to the prediction of protein subcellular localization in green algae. It uses a neural network trained with carefuly curated sets of Chlamydomonas reinhardtii proteins. PredAlgo predicts the localization to one of three compartments: the mitochondrion, the chloroplast, the secretory pathway within the cell.

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::DEVELOPER

Nicolas J. Tourasse or Olivier Vallon

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Mol Biol Evol. 2012 Dec;29(12):3625-39. doi: 10.1093/molbev/mss178.
PredAlgo: a new subcellular localization prediction tool dedicated to green algae.
Tardif M, Atteia A, Specht M, Cogne G, Rolland N, Brugière S, Hippler M, Ferro M, Bruley C, Peltier G, Vallon O, Cournac L.