Pindel 0.2.5b8
:: DESCRIPTION
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
::DEVELOPER
The Genome Institute at Washington University School of Medicine
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / Windows
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Bioinformatics. 2009 Nov 1;25(21):2865-71. Epub 2009 Jun 26.
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads.
Ye K, Schulz MH, Long Q, Apweiler R, Ning Z.