phyloseq 1.27.6 / Shiny-phyloseq – Analysis of High-throughput Phylogenetic Sequence data

phyloseq 1.27.6 / Shiny-phyloseq

:: DESCRIPTION

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others

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Shiny-phyloseq is an interactive web application for demonstrating and using phyloseq.

::DEVELOPER

Paul J. McMurdie, Professor Susan Holmes.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • R package

:: DOWNLOAD

 phyloseq  , Shiny-phyloseq

:: MORE INFORMATION

Citation

Shiny-phyloseq: Web Application for Interactive Microbiome Analysis with Provenance Tracking.
McMurdie PJ, Holmes S.
Bioinformatics. 2014 Sep 26. pii: btu616.

phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data.
McMurdie PJ, Holmes S.
PLoS One. 2013 Apr 22;8(4):e61217. doi: 10.1371/journal.pone.0061217.