PhyloPythiaS 1.3 / PhyloPythiaS+ 1.4
:: DESCRIPTION
PhyloPythiaS is a fast and accurate sequence composition-based classifier that utilizes the hierarchical relationships between clades. Taxonomic assignments with the web server can be made with a generic model, or with sample-specific models that users can specify and create. Several interactive visualization modes and multiple download formats allow quick and convenient analysis and downstream processing of taxonomic assignments.
PhyloPythiaS+ A self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes.
::DEVELOPER
Algorithmic Bioinformatics, Heinrich-Heine-Universität Düsseldorf
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Web Server
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Gregor I, Dröge J, Schirmer M, Quince C, McHardy AC.
PhyloPythiaS+: a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes.
PeerJ. 2016 Feb 8;4:e1603. doi: 10.7717/peerj.1603. PMID: 26870609; PMCID: PMC4748697.
Patil, K. R.; Roune, L. and McHardy, A. C.,
The PhyloPythiaS Web Server for Taxonomic Assignment of Metagenome Sequences.
PLoS ONE 2012, 7 (6).