Peppy
:: DESCRIPTION
Peppy: a fully integrated, proteogenomic mapping software tool. Peppy generates a peptide database from genome files, tracks peptide loci, matches peptides to MS/MS spectra, assigns scores to those matches, and tracks score distributions to find E-Values. To determine false discovery rate thresholds, Peppy automatically generates a decoy database from the original genome files and repeats the entire search process.
::DEVELOPER
The Giddings Lab at Boise State
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / Linux / Mac OsX
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation
Peppy: proteogenomic search software.
Risk BA, Spitzer WJ, Giddings MC.
J Proteome Res. 2013 Jun 7;12(6):3019-25. doi: 10.1021/pr400208w.