PedPhase 3.0 – Haplotype Inference from Genotypes on Pedigree data

PedPhase 3.0

:: DESCRIPTION

PedPhase is a suite of computer programs for haplotype inference from genotypes on pedigree data. It consists of several different algorithms that are designed based on a combinatorial formulation of haplotype inference, namely the minimum-recombinant haplotype configuration (MRHC) problem, and are effective for different types of data.

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::DEVELOPER

Computational Biology lab @ Case (CBC)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 PedPhase

:: MORE INFORMATION

Citation

Li X, Li J.
An almost linear time algorithm for a general haplotype solution on tree pedigrees with no recombination and its extensions.
J Bioinform Comput Biol. 2009 Jun;7(3):521-45.

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