PeanutDB presents many seamlessly integrated web interfaces that allow users to search, filter, navigate and visualize easily the whole transcript assembly, its annotations and detected polymorphisms and simple sequence repeats. For each contig, sequence alignment is presented in both bird’s-eye view and nucleotide level resolution, with colorfully highlighted regions of mismatches, indels and repeats that facilitate close examination of assembly quality, genetic polymorphisms, sequence repeats and/or sequencing errors.
- Web Browser
:: MORE INFORMATION
BMC Plant Biol. 2012 Jun 19;12:94. doi: 10.1186/1471-2229-12-94.
PeanutDB: an integrated bioinformatics web portal for Arachis hypogaea transcriptomics.
Duan X, Schmidt E, Li P, Lenox D, Liu L, Shu C, Zhang J, Liang C.