PATO v1.0.2 – Pangenome Analysis Toolkit

PATO v1.0.2

:: DESCRIPTION

PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species. It allows to analyze the core-genome, accessory genome and whole genome, the population structure, and the horizontal gene transfer dynamics.

Advertisement

:: DEVELOPER

irycis Bioinfo

:: REQUIREMENTS

  • Linux / Window
  • R

:: DOWNLOAD

PATO

:: MORE INFORMATION

Citation

Fernández-de-Bobadilla MD, Talavera-Rodríguez A, Chacón L, Baquero F, Coque TM, Lanza VF.
PATO: Pangenome Analysis Toolkit.
Bioinformatics. 2021 Oct 8:btab697. doi: 10.1093/bioinformatics/btab697. Epub ahead of print. PMID: 34623430.

Leave a Reply

Your email address will not be published.

This site uses Akismet to reduce spam. Learn how your comment data is processed.