OrthoCluster – Synteny Block Detection

OrthoCluster

:: DESCRIPTION

OrthoCluster is a fast and easy-to-use program for the identification of synteny blocks among multiple genomes.

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::DEVELOPER

Jack Chen lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / Windows

:: DOWNLOAD

  OrthoCluster

:: MORE INFORMATION

Citation

Zeng et al.,
OrthoCluster: A New Tool for Mining Syntenic Blocks and Applications in Comparative Genomics“.
In Proceedings of the 11th International Conferences on Extending Database Technology (EDBT’08), Nantes, France, March 25-30, 2008.

Using OrthoCluster for the detection of synteny blocks among multiple genomes.
Vergara IA, Chen N.
Curr Protoc Bioinformatics. 2009 Sep;Chapter 6:Unit 6.10 6.10.1-18. doi: 10.1002/0471250953.bi0610s27.