ORCOM 1.0 – Compressor of Sequencing Reads

ORCOM 1.0

:: DESCRIPTION

ORCOM (Overlapping Reads COmpression with Minimizers) is a compressor of sequencing reads. It takes as an input FASTQ files (possibly gzipped) and stores the DNA symbols of each read in a highly-compressed form.

Advertisement

::DEVELOPER

REFRESH Bioinformatics Group

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 ORCOM

:: MORE INFORMATION

Citation

Disk-based compression of data from genome sequencing.
Grabowski S, Deorowicz S, Roguski Ł.
Bioinformatics. 2014 Dec 22. pii: btu844.