ntJoin v1.0.8 – Genome Assembly Scaffolder using minimizer Graphs

ntJoin v1.0.8

:: DESCRIPTION

ntJoin is an assembly-guided scaffolder which uses a lightweight, alignment-free mapping strategy in lieu of alignments to quickly contiguate a target assembly using one or more

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::DEVELOPER

BC Cancer Canada’s Michael Smith Genome Sciences Centre

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Python

:: DOWNLOAD

ntJoin

:: MORE INFORMATION

Citation

Coombe L, Nikolić V, Chu J, Birol I, Warren RL.
ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs.
Bioinformatics. 2020 Jun 1;36(12):3885-3887. doi: 10.1093/bioinformatics/btaa253. PMID: 32311025; PMCID: PMC7320612.

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