npGSEA 1.28.0 – Permutation Approximation methods for Gene Set Enrichment Analysis

npGSEA 1.28.0

:: DESCRIPTION

npGSEA  (non-permutation GSEA) calculates gene set enrichment statistics and p-values without the computational cost of permutations. It is applicable in settings where one or many gene sets are of interest. There are also built-in plotting functions to help users visualize results.

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::DEVELOPER

Jessica Larson <larson.jess at gmail.com> and Art Owen

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/ MacOsX
  • R
  • BioConductor

:: DOWNLOAD

 npGSEA

:: MORE INFORMATION

Citation

Moment based gene set tests.
Larson JL, Owen AB.
BMC Bioinformatics. 2015 Apr 28;16(1):132.