Methpat 2.0.0
:: DESCRIPTION
Methpat summarises the resultant DNA methylation pattern data from the output of Bismark bismark_methylation_extractor.
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::DEVELOPER
: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ Windows/MacOsX
- Python
- Bismark v0.12.2 and it’s dependencies (bwa v0.7.5a-r405).
:: DOWNLOAD
:: MORE INFORMATION
Citation
MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing.
Wong NC, Pope BJ, Candiloro IL, Korbie D, Trau M, Wong SQ, Mikeska T, Zhang X, Pitman M, Eggers S, Doyle SR, Dobrovic A.
BMC Bioinformatics. 2016 Feb 24;17(1):98. doi: 10.1186/s12859-016-0950-8.