metaBIT 1.1

:: DESCRIPTION

The metaBIT pipeline proposes tools for visualising microbial profiles (barplots, heatmaps) and performing a range of statistical analyses (diversity indices, hierarchical clustering and principal coordinate analysis). It uses as input fastq files containing trimmed reads from shotgun high through-put sequencing.

::DEVELOPER

The Centre for Anthropobiology and Genomics of Toulouse

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

metaBIT

:: MORE INFORMATION

Citation

Louvel G, Der Sarkissian C, Hanghoj K, Orlando L.
metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data.
Mol Ecol Resour. 2016 Nov;16(6):1415-1427. doi: 10.1111/1755-0998.12546. Epub 2016 Jun 22. PMID: 27238636.