MEGA-V

:: DESCRIPTION

MEGA-V is an open-source R application with a Shiny web interface. It identifies gene sets with a significantly higher number of variants in a cohort of interest (cohort A) as compared to (1) a control cohort (cohort B) or (2) a random distribution generated using Monte Carlo.

::DEVELOPER

the Ciccarelli Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows/ Linux
• R

:: DOWNLOAD

MEGA-V

:: MORE INFORMATION

Citation:

Gambardella G, Cereda M, Benedetti L, Ciccarelli FD.
MEGA-V: detection of variant gene sets in patient cohorts.
Bioinformatics. 2017 Apr 15;33(8):1248-1249. doi: 10.1093/bioinformatics/btw809. PMID: 28003259; PMCID: PMC5408849.