LoQuM 0.2 – LOgistic Regression tool for Calibrating the QUality of Short Read Mappings

LoQuM 0.2

:: DESCRIPTION

LoQuM assigns reliable mapping quality scores to mappings of Illumina reads returned by an alignment tool.

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::DEVELOPER

LoQuM team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Python
  • R

:: DOWNLOAD

 LoQuM

:: MORE INFORMATION

Citation

Accurate estimation of short read mapping quality for next-generation genome sequencing.
Ruffalo M, Koyutürk M, Ray S, LaFramboise T.
Bioinformatics. 2012 Sep 15;28(18):i349-i355. doi: 10.1093/bioinformatics/bts408.