Lanc-CSV 0.1 – Local Ancestry Inference using Continental Specific Variants

Lanc-CSV 0.1

:: DESCRIPTION

Lanc-CSV is a method that uses continental-specific variants (i.e. variants present in individuals from only one continental group such as Europeans or Africans) for accurate local ancestry inference.

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::DEVELOPER

Bogdan Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/MacOsX
  • C++ / Matlab

:: DOWNLOAD

  Lanc-CSV

:: MORE INFORMATION

Citation:

PLoS Comput Biol. 2014 Apr 17;10(4):e1003555. doi: 10.1371/journal.pcbi.1003555. eCollection 2014.
Enhanced methods for local ancestry assignment in sequenced admixed individuals.
Brown R1, Pasaniuc B