LACHESIS – Genome Assembly with Contact Probability Maps

LACHESIS

:: DESCRIPTION

LACHESIS is method that exploits contact probability map data (e.g. from Hi-C) for chromosome-scale de novo genome assembly.

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::DEVELOPER

Shendure Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 LACHESIS

 :: MORE INFORMATION

Citation

Nat Biotechnol. 2013 Dec;31(12):1119-25. doi: 10.1038/nbt.2727. Epub 2013 Nov 3.
Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions.
Burton JN1, Adey A, Patwardhan RP, Qiu R, Kitzman JO, Shendure J.

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