KmerStream 1.1 – Computing kmer statistics for massive Genomics Datasets

KmerStream 1.1

:: DESCRIPTION

KmerStream is a streaming algorithm for estimating the number of distinct k-mers present in high throughput sequencing data.

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::DEVELOPER

Pall Melsted

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux
  • C++ COmpiler

:: DOWNLOAD

 KmerStream

:: MORE INFORMATION

Citation

Bioinformatics. 2014 Oct 28. pii: btu713.
KmerStream: Streaming algorithms for k-mer abundance estimation.
Melsted P, Halldórsson BV