Jump3 is based on a formal on/off model of gene expression, but uses a non-parametric procedure based on decision trees (called “jump trees”) to reconstruct the GRN topology, allowing the inference of networks of hundreds of genes.
- Linux / Windows / MacOsX
- MatLab / R Package
:: MORE INFORMATION
Combining tree-based and dynamical systems for the inference of gene regulatory networks.
Huynh-Thu VA, Sanguinetti G.
Bioinformatics. 2015 Jan 7. pii: btu863.