JolyTree 2.1 – Fast Distance-based Phylogenetic Inference from unaligned Genome Sequences

JolyTree 2.1

:: DESCRIPTION

JolyTree implements an alignment-free distance-based procedure for inferring phylogenetic trees from genome contig sequences. For each pair of genomes, a dissimilarity measure is first computed and next transformed to obtain an estimation of the number of substitution events that have occurred during their evolution.

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::DEVELOPER

Alexis Criscuolo (alexis.criscuolo@pasteur.fr)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/  MacOsX

:: DOWNLOAD

JolyTree

:: MORE INFORMATION

Citation

Alexis Criscuolo,
A fast alignment-free bioinformatics procedure to infer accurate distance-based phylogenetic trees from genome assemblies
Research Ideas and Outcomes, 2019, 5:e36178.

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